![]() ![]() But after a while, the connection got disconnected. Initially, his public key authentication was successful. Recently, while connecting to the server via sftp one of our customers was getting the error sftp error code 255. Now, let’s see the major reasons for this sftp related errors and how our Support Engineers fix them. The causes and fixes of sftp error code 255Īt Bobcares, where we have more than a decade of expertise in managing servers, we see many customers facing problems with error sftp error code 255. Now let’s detail the reason for this error and how our Support Engineers fix the problem. In addition to this, we will get the same error if the remote server is not having the ssh access to the server or if there is any firewall restriction. If the remote server to which we are trying to connect is unavailable or down, then the connection via sftp has not been established, and so we received this error. The following reasons are the common cause of this error. Usually, the exit code 255 is a frequent error that happens due to the problem in SSH access. Today, let’s get into the details on how our Support Engineers fix this error. ![]() However, it often shows errors when the remote server is down/unavailable, the remote machine doesn’t have ssh access or has firewall restrictions.Īt Bobcares, we often get requests from our customers to fix an error message sftp error code 255 as part of our Server Management Services. This helps to understand that the problem is not at the sample level.Are you struggling with sftp error code 255? However the same sample run correctly with defuse version 0.4.3. ![]() 006 s Return codes : 255 Commands failed after 1 seconds ![]() tmp Reason : Job command with nonzero return code Job output : Running on server Usage / opt / defuse_master / scripts / merge_clusters. pl > / data / PROJECTS / Defuse / clusters. 7986144378654 Read length min 35 max 80 Generating discordant alignment clustersFailure for defuse command : / opt / defuse_master / scripts / merge_clusters. fastq Importing fastq files Splitting fastq files Discordant alignments Read Stats Fragment mean 196. pl - c / opt / defuse_master / scripts / config. opt / defuse_master / scripts / defuse_run. Is there a solution for this issue? If not, what is the workaround? 1 rathik Maris_NBL_NGS 10725912526 Oct 31 09:03 reads.1.fastqĮven my jobs/ directories are empty. 1 rathik Maris_NBL_NGS 322594 Oct 31 12:13 expression.txtĭrwxr-sr-x. 2 rathik Maris_NBL_NGS 7249 Oct 31 14:47 log Usage /mnt/isilon/dbhi_bfx/rathik/tools/miniconda3/envs/star-fusion-env/opt/defuse/scripts/merge_ clusters1 clusters2. mnt/isilon/dbhi_bfx/rathik/tools/miniconda3/envs/star-fusion-env/opt/defuse/scripts/merge_ > /mnt/isilon/maris_lab/target_nbl_ngs/PPTC-PDX-genomics/mouse_subtraction_pipeline/rna-hybrid/results/defuse/PPTC-AF03-XTP1-A-1-0-R/ Read length min 101 max 101 Generating discordant alignment clusters Importing fastq files Splitting fastq files Discordant alignments Read Statsįragment mean 225.776925740642 stddev 84.2277625266198 ![]()
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